Yeah, I figured that you are guessing on this. The problem with an explanation that involves the surface roughness of the disc causing, directly or indirectly, more lift, is that it would be asymmetrical due to the spin of the disc. The advancing side of the disc and the retreating side of the disc would be affected differently due to spin. If there were additional lift on the advancing side of a thrown disc, precession would cause the the disc to nose up, causing a more rapid onset of fade.
This is just something that would need to be explained away if, somehow, reduced friction drag is the mechanism by which beating in increases understability. Perversely, lift itself causes drag. Add lift, and you add drag. An additional wild card to be explained away.
Another thing that makes me question the skin friction theory is boating. Air is a much less dense fluid than water and surface treatments on boats generally just try to smooth the surface because the friction drag is such a small part of the equation that it generally doesn't merit any shark-skin-like treatment (though such things do exist). The vast majority of the drag comes from moving aside the water through which the boat must move. Discs, flying through air, experience even less drag from skin friction than boats.
You'll also notice that airplanes are simply smooth. Don't you think if the airlines could save fuel and gain added lift that they would scuff them up? The drag that a disc or airplane experiences is primarily, if not wholly, a result of the need to move air out of the way to let the disc/plane move through it.